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AMR Interpretation Engine

by Brigham and Women's Hospitalv26.3.26

Last updated

The AMR Interpretation Engine is a standalone software which can interpret AMR measurements using CLSI and EUCAST breakpoints. The system also includes resource files which can be used independently of the interpretation system by 3rd parties.

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Install with winget

$ winget install --id WHONET.AMRIE --exact --version 26.3.26

Run in Command Prompt, PowerShell, or Windows Terminal. Prompts for any agreements.

Silent install command for AMR Interpretation Engine

AMR Interpretation Engine uses MSI (WiX). The silent install switches are /quiet.

One-line silent install (x86, machine scope)
msiexec.exe /i AMR_Interpretation_Engine_v26.3.26.msi /quiet

See the full silent install reference for AMR Interpretation Engine →

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About

This software was created by the WHONET development team (https://whonet.org) to facilitate the interpretation of antibiotic measurements according to the various supported guidelines available for this purpose, and published by those groups (CLSI, EUCAST, etc.).

The system can be integrated with your project via the Interpretation Engine library, or it can be used directly with either the command line interface or interactive interface projects.

The interactive interface is designed primarily to allow you to exercise the various functions of the system, but it can also allow you to process an input file into an output file with the interpretations.

The command-line interface facilitates easy incorporation with a 3rd-party system since the developer does not need to know how to use the various library functions associated. With that said, the CLI project is very small, so it should serve as a window into how to accomplish the basic needs if direct library integration was preferred.

The breakpoints and other tables will be kept up-to-date over time (Interpretaion Engine\Resources), and are useful in their own right, even if the software implementation of the engine is not for your purposes. For example, there are several groups who only utilize our tables. This repository now serves as the official source for these WHONET-related resources.

To process a complete data file, the input file must use WHONET naming conventions for the data columns. Sample data and configuration files are also provided in the Interpretation Engine\Resources\ folder.

We also provide SQL queries which can demonstrate certain aspects of the system, but which are not used directly by the code here. We have chosen to implement these function as pure C# code to assist others if they choose to make their own implementations, and also to eliminate any dependence on a certain database technology. Because the application only uses C# with a recent .NET version, it should be possible to build the library code for many platforms.

Installers · v26.3.26

ArchitectureTypeScopeInstallDownload
x86MSI
WiX
machineDirect

Copy a command tailored to that specific architecture, type, and scope - useful when winget would otherwise pick a different default.

Security

No known CVEs for AMR Interpretation Engine.

Coverage is best-effort and depends on a winget package mapping to an NVD CPE entry. Absence here is not a guarantee of safety.

Related apps

  • WHONET 2026Brigham and Women's Hospital
    WHONET.WHONETv26.8.27

    WHONET is a free desktop Windows application for the management and analysis of microbiology laboratory data with a particular focus on antimicrobial resistance surveillance.

  • WHONET Automation ToolBrigham and Women's Hospital
    WHONET.AutomationToolv22.7.19

    The Automation Tool can be configured to execute an entire workflow of data processing, aggregation, and analysis steps.

More from Brigham and Women's Hospital or browse AMR, Antibiotics, Bacteriology.

Frequently asked questions

How do I install AMR Interpretation Engine on Windows?
Open Windows Terminal, PowerShell, or Command Prompt and run: winget install --id WHONET.AMRIE --exact --version 26.3.26. winget downloads the installer from Brigham and Women's Hospital and runs it. Requires Windows 10 (1809+) or Windows 11.
How do I install AMR Interpretation Engine silently for unattended deployment?
Add --silent and accept the agreements upfront: winget install --id WHONET.AMRIE --exact 26.3.26 --silent --accept-package-agreements --accept-source-agreements. This is the variant Intune, Configuration Manager, and other deployment tools should use.
What are the silent install switches for AMR Interpretation Engine?
AMR Interpretation Engine uses MSI (WiX). Run the downloaded installer with: msiexec.exe /i AMR_Interpretation_Engine_v26.3.26.msi /quiet. The silent switches are /quiet.
How do I uninstall AMR Interpretation Engine via winget?
Run: winget uninstall --id WHONET.AMRIE --exact. Add --silent for unattended uninstalls. winget will use the registered uninstaller from AMR Interpretation Engine's Apps & Features entry.
Is AMR Interpretation Engine free?
AMR Interpretation Engine is distributed under GPL-3.0. Refer to the publisher (https://github.com/AClark-WHONET/AMRIE) for the full license terms - Wingetly itself does not charge for installation.
Does AMR Interpretation Engine work on Windows 10?
Yes, as long as your Windows 10 build supports winget (1809 or newer). winget ships with App Installer on Windows 10/11 and pulls AMR Interpretation Engine directly from the publisher.
How do I keep AMR Interpretation Engine up to date?
Run winget upgrade --id WHONET.AMRIE --exact, or winget upgrade --all to update everything winget tracks. We index 10 versions of AMR Interpretation Engine from microsoft/winget-pkgs.

Recent versions

  • 26.3.26latest
  • 25.4.3
  • 24.11.1
  • 24.8.29
  • 24.8.12
  • 24.7.9
  • 24.6.28
  • 24.6.13
  • 24.2.16
  • 23.12.21